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RESALI script ready

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Corentin Choisy
2024-04-18 17:33:32 +02:00
parent 1efe30e6e3
commit 2d778f2362
2 changed files with 96 additions and 21 deletions
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66
RProject/Scripts/resali_generate_newdata.R
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@ -16,7 +16,7 @@ results <- c(results,results2)
## Importer l'analyse resali pour chaque scenario
for (r in results[21:length(results)]) {
for (r in results) {
cat('--------------------------------------------------------------------------\n')
cat(paste0(r,"\n"))
cat('--------------------------------------------------------------------------\n')
@ -82,3 +82,67 @@ for (r in results[21:length(results)]) {
}
write.csv(datt,paste0("/home/corentin/Documents/These/Recherche/Simulations/Analysis/RESALI/Detection_data/",r,".csv"))
}
for (r in results) {
cat('--------------------------------------------------------------------------\n')
cat(paste0(r,"\n"))
cat('--------------------------------------------------------------------------\n')
#### Importer les datas
scen <- as.numeric(gsub("[A,B,C,D,E,F,G,_]","",substr(r,0,3)))
if (substr(r,start=nchar(r)-1,stop=nchar(r))=="50") {
N <- 50
}
if (substr(r,start=nchar(r)-2,stop=nchar(r))=="100") {
N <- 100
}
if (substr(r,start=nchar(r)-2,stop=nchar(r))=="200") {
N <- 200
}
if (substr(r,start=nchar(r)-2,stop=nchar(r))=="300") {
N <- 300
}
#### Importer l'analyse
analyse <- read.csv(paste0("/home/corentin/Documents/These/Recherche/Simulations/Analysis/RESALI/Detection_data/",r,".csv"))
analyse[is.na(analyse)] <- ""
names(analyse)[names(analyse)=="dif.detect.1"] <- "dif_detect_1"
names(analyse)[names(analyse)=="dif.detect.2"] <- "dif_detect_2"
names(analyse)[names(analyse)=="dif.detect.3"] <- "dif_detect_3"
names(analyse)[names(analyse)=="dif.detect.4"] <- "dif_detect_4"
names(analyse)[names(analyse)=="dif.detect.unif.1"] <- "dif_detect_unif_1"
names(analyse)[names(analyse)=="dif.detect.unif.2"] <- "dif_detect_unif_2"
names(analyse)[names(analyse)=="dif.detect.unif.3"] <- "dif_detect_unif_3"
names(analyse)[names(analyse)=="dif.detect.unif.4"] <- "dif_detect_unif_4"
analyse[analyse$dif_detect_1==999,"dif_detect_1"] <- ""
analyse[analyse$dif_detect_2==999,"dif_detect_2"] <- ""
analyse[analyse$dif_detect_3==999,"dif_detect_3"] <- ""
analyse[analyse$dif_detect_4==999,"dif_detect_4"] <- ""
analyse[analyse$dif_detect_unif_1==999,"dif_detect_unif_1"] <- ""
analyse[analyse$dif_detect_unif_2==999,"dif_detect_unif_2"] <- ""
analyse[analyse$dif_detect_unif_3==999,"dif_detect_unif_3"] <- ""
analyse[analyse$dif_detect_unif_4==999,"dif_detect_unif_4"] <- ""
if (scen==3 | scen==4 | scen>=13) {
names(analyse)[names(analyse)=="dif.detect.5"] <- "dif_detect_5"
names(analyse)[names(analyse)=="dif.detect.6"] <- "dif_detect_6"
names(analyse)[names(analyse)=="dif.detect.7"] <- "dif_detect_7"
names(analyse)[names(analyse)=="dif.detect.unif.5"] <- "dif_detect_unif_5"
names(analyse)[names(analyse)=="dif.detect.unif.6"] <- "dif_detect_unif_6"
names(analyse)[names(analyse)=="dif.detect.unif.7"] <- "dif_detect_unif_7"
analyse[analyse$dif_detect_5==999,"dif_detect_5"] <- ""
analyse[analyse$dif_detect_6==999,"dif_detect_6"] <- ""
analyse[analyse$dif_detect_7==999,"dif_detect_7"] <- ""
analyse[analyse$dif_detect_unif_5==999,"dif_detect_unif_5"] <- ""
analyse[analyse$dif_detect_unif_6==999,"dif_detect_unif_6"] <- ""
analyse[analyse$dif_detect_unif_7==999,"dif_detect_unif_7"] <- ""
}
analyse <- analyse[,!names(analyse) %in% c("X","X.1","X.2")]
write.csv(analyse,paste0("/home/corentin/Documents/These/Recherche/Simulations/Analysis/RESALI/Detection_data/",r,".csv"))
}